[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 8,024 items for (author: qi & l)

EMDB-36147:
Extracellular domain of gamma delta TCR
Method: single particle / : Xin W, Chi X, Huang B, Su Q, Zhou Q

EMDB-36149:
V gamma9 V delta2 TCR and CD3 complex in LMNG
Method: single particle / : Xin W, Huang B, Chi X, Xu M, Zhang Y, Li X, Su Q, Zhou Q

EMDB-36152:
Vgamma5 Vdelta1 TCR complex (MPDI/TMDI)
Method: single particle / : Xin W, Huang B, Chi X, Liu Y, Xu M, Zhang Y, Li X, Su Q, Zhou Q

EMDB-36153:
Vgamma5 Vdelta1 TCR complex (MPDII/TMDII)
Method: single particle / : Xin W, Huang B, Chi X, Liu Y, Xu M, Zhang Y, Li X, Su Q, Zhou Q

EMDB-36155:
Vgamma5 Vdelta1 TCR complex (MPD/TMD)
Method: single particle / : Xin W, Huang B, Chi X, Liu Y, Xu M, Zhang Y, Li X, Su Q, Zhou Q

EMDB-36156:
Vgamma5 Vdelta1 T cell receptor complex
Method: single particle / : Xin W, Huang B, Chi X, Xu M, Zhang Y, Li X, Su Q, Zhou Q

EMDB-37904:
Vgamma5Vdelta1 EH TCR-CD3 complex
Method: single particle / : Xin W, Huang B, Chi X, Xu M, Zhang Y, Li X, Su Q, Zhou Q

EMDB-37914:
T cell receptor delta 2 gamma 9 with F283A, F290A, and F291A
Method: single particle / : Xin W, Huang B, Chi X, Liu Y, Xu M, Zhang Y, Li X, Su Q, Zhou Q

EMDB-37929:
T cell receptor delta 2 gamma 9 with TCRD TM domain chimera of TRAC
Method: single particle / : Xin W, Huang B, Chi X, Liu Y, Xu M, Zhang Y, Li X, Su Q, Zhou Q

EMDB-39128:
T cell receptor V delta2 V gamma9 in GDN
Method: single particle / : Xin W, Huang B, Chi X, Xu M, Zhang Y, Li X, Su Q, Zhou Q

EMDB-39359:
T cell receptor V delta2 V gamma9 in GDN (DeepEMhancer)
Method: single particle / : Xin W, Huang B, Chi X, Xu M, Zhang Y, Su Q, Zhou Q

EMDB-39361:
Vgamma5 Vdelta1 TCR complex (MPDI/TMDI, DeepEMhancer)
Method: single particle / : Xin W, Huang B, Chi X, Liu Y, Xu M, Zhang Y, Li X, Su Q, Zhou Q

EMDB-39362:
Vgamma5 Vdelta1 TCR complex (MPDII/TMDII, DeepEMhancer)
Method: single particle / : Xin W, Huang B, Chi X, Liu Y, Xu M, Zhang Y, Li X, Su Q, Zhou Q

EMDB-39363:
V gamma9 V delta2 TCR and CD3 complex in LMNG (DeepEMhancer)
Method: single particle / : Xin W, Huang B, Chi X, Xu M, Zhang Y, Li X, Su Q, Zhou Q

EMDB-39367:
Vgamma5 Vdelta1 TCR-CD3 complex (EH mutant, DeepEMhancer)
Method: single particle / : Xin W, Huang B, Chi X, Xu M, Zhang Y, Li X, Su Q, Zhou Q

PDB-8jbv:
Extracellular domain of gamma delta TCR
Method: single particle / : Xin W, Chi X, Huang B, Su Q, Zhou Q

PDB-8jc0:
V gamma9 V delta2 TCR and CD3 complex in LMNG
Method: single particle / : Xin W, Huang B, Chi X, Xu M, Zhang Y, Li X, Su Q, Zhou Q

PDB-8jcb:
Vgamma5 Vdelta1 T cell receptor complex
Method: single particle / : Xin W, Huang B, Chi X, Xu M, Zhang Y, Li X, Su Q, Zhou Q

PDB-8wxe:
Vgamma5Vdelta1 EH TCR-CD3 complex
Method: single particle / : Xin W, Huang B, Chi X, Xu M, Zhang Y, Li X, Su Q, Zhou Q

PDB-8wy0:
T cell receptor delta 2 gamma 9 with F283A, F290A, and F291A
Method: single particle / : Xin W, Huang B, Chi X, Liu Y, Xu M, Zhang Y, Li X, Su Q, Zhou Q

PDB-8wyi:
T cell receptor delta 2 gamma 9 with TCRD TM domain chimera of TRAC
Method: single particle / : Xin W, Huang B, Chi X, Liu Y, Xu M, Zhang Y, Li X, Su Q, Zhou Q

PDB-8yc0:
T cell receptor V delta2 V gamma9 in GDN
Method: single particle / : Xin W, Huang B, Chi X, Xu M, Zhang Y, Li X, Su Q, Zhou Q

EMDB-41639:
Langya henipavirus fusion protein in postfusion state
Method: single particle / : Wang Z, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-41640:
Langya henipavirus fusion protein in prefusion state
Method: single particle / : Wang Z, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-41641:
Langya henipavirus postfusion F protein in complex with the 4G5 Fab, local refinement of the viral membrane distal region
Method: single particle / : Wang Z, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-41642:
Langya henipavirus postfusion F protein in complex with 4G5 Fab, local refinement of the viral membrane proximal region
Method: single particle / : Wang Z, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-41644:
Langya henipavirus postfusion fusion protein in complex with 4G5 Fab (global refinement)
Method: single particle / : Wang Z, Veesler D

PDB-8tve:
Langya henipavirus fusion protein in postfusion state
Method: single particle / : Wang Z, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-8tvf:
Langya henipavirus fusion protein in prefusion state
Method: single particle / : Wang Z, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-8tvg:
Langya henipavirus postfusion F protein in complex with the 4G5 Fab, local refinement of the viral membrane distal region
Method: single particle / : Wang Z, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-8tvh:
Langya henipavirus postfusion F protein in complex with 4G5 Fab, local refinement of the viral membrane proximal region
Method: single particle / : Wang Z, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-36850:
SARS-CoV-2 Omicron BA.1 spike protein in complex with a self-assembling trivalent nanobody Tr67
Method: single particle / : Jiang XY, Qin Q, Qian JQ, Zhu HX, Huang Q

EMDB-36732:
Cryo-EM structure of the gasdermin pore from Trichoplax adhaerens
Method: single particle / : Hou YJ, Sun Q, Zeng H, Ding J

EMDB-36734:
Cryo-EM structure of RCD-1 pore from Neurospora crassa
Method: single particle / : Hou YJ, Sun Q, Li Y, Ding J

PDB-8jyw:
Cryo-EM structure of the gasdermin pore from Trichoplax adhaerens
Method: single particle / : Hou YJ, Sun Q, Zeng H, Ding J

PDB-8jyz:
Cryo-EM structure of RCD-1 pore from Neurospora crassa
Method: single particle / : Hou YJ, Sun Q, Li Y, Ding J

EMDB-39368:
Extracellular domain of Vgamma5 Vdelta1 TCR (DeepEMhancer)
Method: single particle / : Xin W, Huang B, Chi X, Xu M, Zhang Y, Li X, Su Q, Zhou Q

EMDB-38828:
Closed conformation of HKU1-B S protein after incubation of the receptor
Method: single particle / : Xia LY, Zhang YY, Zhou Q

EMDB-38829:
1up-1 conformation of HKU1-B S protein after incubation of the receptor
Method: single particle / : Xia LY, Zhang YY, Zhou Q

EMDB-38830:
1up-2 conformation of HKU1-B S protein after incubation of the receptor
Method: single particle / : Xia LY, Zhang YY, Zhou Q

EMDB-38831:
2up-1 conformation of HKU1-B S protein after incubation of the receptor
Method: single particle / : Xia LY, Zhang YY, Zhou Q

EMDB-38832:
2up-TM conformation of HKU1-B S protein after incubation of the receptor
Method: single particle / : Xia LY, Zhang YY, Zhou Q

EMDB-38833:
3up-TM conformation of HKU1-B S protein after incubation of the receptor
Method: single particle / : Xia LY, Zhang YY, Zhou Q

EMDB-38834:
The closed conformation of the HKU1-B S protein in the apo state
Method: single particle / : Xia LY, Zhang YY, Zhou Q

EMDB-38835:
The 1up conformation of the HKU1-B S protein in the apo state
Method: single particle / : Xia LY, Zhang YY, Zhou Q

EMDB-38836:
The closed conformation of the HKU1-B S protein in the apo state
Method: single particle / : Xia LY, Zhang YY, Zhou Q

PDB-8y19:
Closed conformation of HKU1-B S protein after incubation of the receptor
Method: single particle / : Xia LY, Zhang YY, Zhou Q

PDB-8y1a:
1up-1 conformation of HKU1-B S protein after incubation of the receptor
Method: single particle / : Xia LY, Zhang YY, Zhou Q

PDB-8y1b:
1up-2 conformation of HKU1-B S protein after incubation of the receptor
Method: single particle / : Xia LY, Zhang YY, Zhou Q

PDB-8y1c:
2up-1 conformation of HKU1-B S protein after incubation of the receptor
Method: single particle / : Xia LY, Zhang YY, Zhou Q

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more